The datasets consist of soil moisture (hourly-weekly), river stage (1 min), and groundwater level (hourly) collected as part of the BRAVE project (NE/M008827/1 and NE/M008983/1) to understand the resilience of boreholes in low-yielding aquifers in the River Volta Basin to climate. The data were collected from physical observatories in Sanon (Burkina Faso) and Aniabisi (Ghana). Soil moisture data were logged hourly beneath contrasting land uses and roaming soil moisture surveys were also undertaken across a wider access tube array. River stage was monitored at the catchment outlet in Sanon and groundwater levels were measured in both catchments.